« Back
Characterization of the prehaustorial resistance against leaf rust (Puccinia triticina f. sp. tritici) in Einkorn (Triticum monococcum) by massive analysis of cDNA ends (MACE)
Poster Title: Characterization of the prehaustorial resistance against leaf rust (Puccinia triticina f. sp. tritici) in Einkorn (Triticum monococcum) by massive analysis of cDNA ends (MACE)
Submitted on 11 Jul 2014
Author(s): Albrecht Serfling1,2, Sven Templer1,3, Dragan Perovic1, Frank Ordon1
Affiliations: 1 Julius Kuehn-Institute (JKI) Federal Research Centre for Cultivated Plants, Institute for Resistance Research and Stress Tolerance, 06484 Quedlinburg, Germany 2 Interdisciplinary Center for Crop Plant Research, Martin Luther University Halle-Wittenberg, Hoher Weg 8, 06120 Halle (Saale), Germany 3 Max Planck Institute for Plant Breeding Research, Carl-von-Linne-Weg 10, 50829 Cologne, Germany
This poster was presented at EUCARPIA Cereals Section - ITMI Joint Conference
Poster Views: 1,302
View poster »

Poster Information
Abstract: Leaf rust caused by Puccinia triticina f. sp. tritici is the most common rust disease of wheat and causes high yield losses worldwide. Triticum monococcum accessions are valuable sources for improving leaf rust resistance in hexaploid wheat. In extensive screening programs T. monococcum accession Pi272560 has been identified showing prehaustorial resistance against leaf rust. First experiments revealed that the effective defense reaction is associated with an increased activity of peroxidases and pathogenesis related genes. This race non-specific (horizontal) prehaustorial resistance prevents the infection prior to the formation of haustorial mother cells. Hence the goals of our studies are (i) to analyze the biochemical background of this resistance by microscopy and measurement of the H2O2 content in leaves and (ii) to determine the molecular background by genome wide expression studies using the massive analysis of cDNA ends (MACE). A xylenol orange assay revealed higher amounts of H2O2 up to 1.88 µM g-1 in inoculated leaves 12 to 48 hours after inoculation (hai) in the resistant accession. In order to analyze the expression of genes which led to observed defense reactions, MACE from RNA samples which were isolated within the first 24 hai from resistant and susceptible T. monococcum accession has been conducted. Within the time segment from 0-8 hai 120950 tags, between 8-16 hai 95147 tags, and between 16-24 hai 90150 tags could be annotated to the Swissprot database. Using the counts per million determined tags (cpm) up to 8 hai 423, between 8-16 hai 523, and between 16-24 hai 552 tags differentially expressed were identified. These tags have been blasted to the NCBI database and differentially expressed peroxidases (between 9-31), chitinases (2-13), kinases (32-80) and pathogenesis related genes (0-18) were determined. The results show that higher or exclusive expression of peroxidases, chitinases and pathogenesis related genes are involved in prehaustorial resistance. In addition seven genes related to (leaf rust) resistance genes were detected. Based on the analysis of 1136 tags differentially expressed comprising 4358 SNPs, 362 differentially expressed SNP containing genes were mapped in silico using the Genomezipper.Summary: Triticum monococcum, a valuable source for horizontal resistance against P. triticina was analyzed microscopically and by transcriptional profiling. MACE showed the increased expression of chitinases, kinases, peroxidases and pathogenesis related genes in the first 8 hai. The high number of differentially expressd tags and the knowledge about SNPs facilitates in silico mapping and the development of polymorphic markers which may accelerate the transfer of this prehaustorial resistance References: Report abuse »
Ask the author a question about this poster.
Ask a Question »

Creative Commons

Related Posters

How to explore cancer related mutations using NGS
CD Genomics

Is There an Association Between H. pylori infection and MALT lymphoma development ?!

automated, low-cost, miniaturized RNA-Seqand DNAseqlibrary preps
SrimeenakshiSrinivasan2, PaymanehMalihi3, Peter De Hoff2, Tiffany Herrero2, To Cuong2, Joby Jenkins1, Louise Laurent2, James Hicks3, Peter Kuhn3

miniaturization and automation of CEL-Seq2 and SMART-Seq2 using the mosquito liquid handler
Josip Herman1, Jon Penterman2, Sagar1, Andreas Diefenbach3, Antigoni Triantafyllopoulou4, Anne F. Hammerstein5, Joby Jenkins5, Dominic Grün1, Stuart S. Levine2 and Klaus Hentrich5

ExpiSf™ Expression system: A Chemically Defined Baculovirus-Based System for Enhanced Protein and Virus Production in Sf9 Cells
Kenneth Thompson, Maya Yovcheva, Sara Barnes, Melissa Cross, Katy Irvin, Natasha Lucki, Henry Chiou, and Jonathan Zmuda